The goals of the IGVF Data Administrative and Coordinating Center (DACC) are to support the IGVF Consortium by defining and establishing a strategy that connects all participants to the project’s science. By creating avenues of access that distribute these data to the greater biological research community, the DACC provides a critical connection between scientific producers and consumers.

HG012012

A Data and Administrative Coordinating Center for the Impact of Genomic Variation on Function Consortium

j-michael-cherry

Corinn Small

J. Michael Cherry, Stanford

HG012041

Linking genome variation to transcriptional network dynamics in human B cells

HG011967

Design, prediction, and prioritization of systematic perturbations of the human genome

HG012022

Supporting IGVF by modeling genetics, function, and phenotype with machine learning

HG011989

Molecular phenotyping of ~100,000 coding variants across Mendelian disease genes

HG012010

Comprehensive characterization of variants underlying heart and blood diseases with CRISPR base editing

HG012009

Predicting the impact of genetic variants, genes and pathways on human disease

HG011966

Massively parallel characterization of variants and elements impacting transcriptional regulation in dynamic cellular systems

HG012053

High-Throughput Functional Annotation of Gene Regulatory Elements and Variants Critical to Complex Cellular Phenotypes

HG012051

Genomic control of gene regulatory networks governing early human lineage decisions

R00HG012203

New Approaches for leveraging single-cell data to identify disease-critical genes and gene sets

Community

HG012079

Leveraging genetic variation to dissect gene regulatory networks of reprogramming to pluripotency

HG011969

The Center for Actionable Variant Analysis; measuring variant function at scale

HG012077

Center for Mouse Genomic Variation at Single Cell Resolution

HG012059

The impact of genomic variation on environment-induced changes in pancreatic beta-cell states

HG011996

Multiscale functional characterization of genomic variation in human developmental disorders

HG012047

Defining causal roles of genomic variants on gene regulatory networks with spatiotemporally-resolved single-cell multiomics

HG012003

Systematic in vivo characterization of disease-associated regulatory variants

HG011986

A foundational resource of functional elements, TF footprints and gene regulatory interactions

HG012103

Deciphering the Genomics of Gene Network Regulation of T Cell and Fibroblast States in Autoimmune Inflammation

HG012069

Predicting context-specific molecular and phenotypic effects of genetic variation through the lens of the cis-regulatory code

HG012064

Predictive Modeling of the Functional and Phenotypic Impacts of Genetic Variants

HG011972

Stanford Center for Connecting DNA Variants to Function and Phenotype

HG012070

WashU-Northwestern Genomic Variation and Function Data and Administrative Coordinating Center

HG012076

Single-cell Mapping Center for Human Regulatory Elements and Gene Activity

HG012039

Linking Variants to Multi-scale Phenotypes via a Synthesis of Subnetwork Inference and Deep Learning

HG011952

Predicting the Impact of Genomic Variation on Cellular States

HG0120123

mock award for wrangler training

affiliate

IGVF affiliate

help

Khine Lin

Help & Documentation

thomas-quertermous

Thomas Quertermous, Stanford

len-pennacchio

Len Pennacchio, Lawrence Berkeley

alan-boyle

Alan Boyle, UMich

sean-mooney

Sean Mooney, UW

chongyuan-luo

Chongyuan Luo, UCLA

ryan-corces

Ryan Corces, Gladstone Institute UCSF

maike-sander

Maike Sander, UCSD

hongjun-song

Hongjun Song, UPenn

andrew-allen

Andrew Allen, Duke

christina-leslie

Christina Leslie, MSKCC

shamil-sunyaev

Shamil Sunyaev, Brigham and Women's Hospital

maria-chahrour

Maria Chahrour, UT

alkes-price

Alkes Price, Harvard

doug-fowler

Doug Fowler, UW

lea-starita

Lea Starita, UW

benhur-lee

Benhur Lee, Mount Sinai

hilary-finucane

Hilary Finucane, Broad

kyle-gaulton

Kyle Gaulton, UCSD

bradley-bernstein

Bradley Bernstein, Broad

michael-beer

Michael Beer, JHU

benjamin-kleinstiver

Benjamin Kleinstiver, MGH

ryan-mills

Ryan Mills, UMich

marlene-rabinovitch

Marlene Rabinovitch, Stanford

nhgri

Idan Gabdank, NHGRI

gary-hon

Gary Hon, UT

community

External Lab, community

qiongshi-lu

Qiongshi Lu, UW Madison

guillaume-lettre

Guillaume Lettre, MHI

jishnu-das

Jishnu Das, University of Pittsburgh

lior-pachter

Lior Pachter, Caltech

audrey-gasch

Audrey Gasch, UW Madison

jason-buenrostro

Jason Buenrostro, Broad

ansuman-satpathy

Ansuman Satpathy, Stanford

leif-ludwig

Leif Ludwig, MDC

nadav-ahituv

Nadav Ahituv, UCSF

luca-pinello

Luca Pinello, MGH

will-greenleaf

Will Greenleaf, Stanford

livnat-jerby

Livnat Jerby, Stanford

barbara-wold

Barbara Wold, Caltech

hannah-carter

Hannah Carter, UCSD

bruce-posner

Bruce Posner, UT

noah-zaitlen

Noah Zaitlen, UCSF

laura-donlin

Laura Donlin, HSS

jay-shendure

Jay Shendure, UW

jesse-engreitz

Jesse Engreitz, Stanford

bing-ren

Bing Ren, UCSD

grant-macgregor

Grant MacGregor, UCI

michael-love

Michael Love, UNC

marc-vidal

Marc Vidal, DFCI

kim-green

Kim Green, UCI

jill-moore

Jill Moore, UMass

hao-wu

Hao Wu, UPenn

tom-norman

Tom Norman, MSKCC

raluca-gordan

Raluca Gordan, Duke

frederick-roth

Frederick Roth, UToronto

mikko-taipale

Mikko Taipale, UToronto

predrag-radivojac

Predrag Radivojac, Northeastern

daniel-bauer

Daniel Bauer, HSCI

anne-carpenter

Anne Carpenter, Broad

maureen-sartor

Maureen Sartor, UMich

soumya-raychaudhuri

Soumya Raychaudhuri, Brigham and Women's Hospital

alexis-battle

Alexis Battle, JHU

karen-mohlke

Karen Mohlke, UNC

maya-kasowski

Maya Kasowski, Stanford

w-lee-kraus

William Kraus, UT

mark-craven

Mark Craven, UW Madison

nidhi-sahni

Nidhi Sahni, MD Anderson

jimmie-ye

Jimmie Ye, Stanford